Stem-loop sequence sfr-mir-2b

AccessionMI0033599 (change log)
DescriptionSpodoptera frugiperda miR-2b stem-loop
Literature search

1 open access papers mention sfr-mir-2b
(2 sentences)

Stem-loop 
            -     -       a       uc 
5' cggcgcuca caaag uggcugu augugug  c
   ||||||||| ||||| ||||||| |||||||   
3' gucgcgagu guuuc accgaca uauacau  c
            a     g       c       gc
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM75363v2; GCA_000753635.2) Overlapping transcripts
JQCY02000649.1: 55212-55277 [-]
intergenic
Clustered miRNAs
< 10kb from sfr-mir-2b
sfr-mir-2aJQCY02000649.1: 55599-55680 [-]
sfr-mir-13aJQCY02000649.1: 55432-55568 [-]
sfr-mir-13bJQCY02000649.1: 55342-55420 [-]
sfr-mir-2bJQCY02000649.1: 55212-55277 [-]
sfr-mir-2cJQCY02000649.1: 55067-55151 [-]
Database links

Mature sequence sfr-miR-2b-5p

Accession MIMAT0041876
Sequence

6 -  

cucacaaaguggcuguaaugug

 - 27

Get sequence
Evidence experimental; Illumina [1]

Mature sequence sfr-miR-2b-3p

Accession MIMAT0041877
Sequence

40 -  

uaucacagccagcuuugaugagc

 - 62

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:25693181 "Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21" Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK PLoS One. 10:e0116988(2015).