Stem-loop sequence sfr-mir-2a

AccessionMI0033596 (change log)
DescriptionSpodoptera frugiperda miR-2a stem-loop
Literature search

1 open access papers mention sfr-mir-2a
(3 sentences)

Stem-loop 
       u    u  -g         c    u  c    g - a 
5' aaug gguu ug  caucaaagu ggcu gu auag u c u
   |||| |||| ||  ||||||||| |||| || |||| | | a
3' uuac ccag ac  guaguuucg ccga ca uauc a g a
       u    u  ga         a    -  c    g u c
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM75363v2; GCA_000753635.2) Overlapping transcripts
JQCY02000649.1: 55599-55680 [-]
intergenic
Clustered miRNAs
< 10kb from sfr-mir-2a
sfr-mir-2aJQCY02000649.1: 55599-55680 [-]
sfr-mir-13aJQCY02000649.1: 55432-55568 [-]
sfr-mir-13bJQCY02000649.1: 55342-55420 [-]
sfr-mir-2bJQCY02000649.1: 55212-55277 [-]
sfr-mir-2cJQCY02000649.1: 55067-55151 [-]
Database links

Mature sequence sfr-miR-2a-5p

Accession MIMAT0041870
Sequence

13 -  

gcaucaaagucggcuugucau

 - 33

Get sequence
Evidence experimental; Illumina [1]

Mature sequence sfr-miR-2a-3p

Accession MIMAT0041871
Sequence

51 -  

ucacagccagcuuugaugagca

 - 72

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:25693181 "Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21" Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK PLoS One. 10:e0116988(2015).