Stem-loop sequence sfr-mir-279a

AccessionMI0033591 (change log)
DescriptionSpodoptera frugiperda miR-279a stem-loop
Literature search

1 open access papers mention sfr-mir-279a
(1 sentences)

Stem-loop 
       c        a  u       gc     ugaa 
5' gcuc uaaugggu ua gucuagu  cacag    u
   |||| |||||||| || |||||||  |||||     
3' cgag guuacuca au uagauca  guguc    u
       a        c  c       --     uuua
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM75363v2; GCA_000753635.2) Overlapping transcripts
JQCY02004261.1: 8339-8408 [-]
intergenic
Clustered miRNAs
< 10kb from sfr-mir-279a
sfr-mir-279aJQCY02004261.1: 8339-8408 [-]
sfr-mir-279cJQCY02004261.1: 8111-8173 [-]
Database links

Mature sequence sfr-miR-279a-5p

Accession MIMAT0041862
Sequence

7 -  

aauggguauaugucuagugc

 - 26

Get sequence
Evidence experimental; Illumina [1]

Mature sequence sfr-miR-279a-3p

Accession MIMAT0041863
Sequence

45 -  

ugacuagaucuacacucauug

 - 65

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:25693181 "Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21" Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK PLoS One. 10:e0116988(2015).