miRBase entry: sfr-mir-10454e

Stem-loop sfr-mir-10454e


Accession
MI0033564
Description
Spodoptera frugiperda sfr-mir-10454e precursor miRNA


Sequence

ggggccuuagucugcuauuacaauugUGUCACAAUGGUCGAUCACUgaacagugcaagagugcagugcucAGUGAUCGGCCAUUCUGACAcaauuguaauagcagacuaagguccc
(((((((((((((((((((((((((((((((.((((((((((((((((.((.((((....)))).)).)))))))))))))))).)))))))))))))))))))))))))))))))

Structure
                               C                a  g    a 
ggggccuuagucugcuauuacaauugUGUCA AAUGGUCGAUCACUga ca ugca g
||||||||||||||||||||||||||||||| |||||||||||||||| || ||||  
cccuggaaucagacgauaauguuaacACAGU UUACCGGCUAGUGAcu gu acgu a
                               C                c  g    g 


Annotation confidence Not enough data
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Genome context
JQCY02000167.1: 42799-42914 [+]

Database links

Mature sfr-miR-10454e-5p

Accession MIMAT0041810
Description Spodoptera frugiperda sfr-miR-10454e-5p mature miRNA
Sequence 27 - UGUCACAAUGGUCGAUCACU - 46
Evidence experimental
Illumina [1]

Mature sfr-miR-10454e-3p

Accession MIMAT0041811
Description Spodoptera frugiperda sfr-miR-10454e-3p mature miRNA
Sequence 71 - AGUGAUCGGCCAUUCUGACA - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988