miRBase entry: sfr-mir-10454d

Stem-loop sfr-mir-10454d


Accession
MI0033563
Description
Spodoptera frugiperda sfr-mir-10454d precursor miRNA


Sequence

ugcuauuacaauugUGUCAGAAUGGUCGAUCAUUgagcagugcaagagggacagagcuaugaagguuguauagcuaugaagguuguauagcuucaucccucuugcacugcucAGUGAUCGGCCAUUCUGACAcaauuguaauagca
(((((((((((((((((((((((((((((((((((((((((((((((((((........(((((.((((((((((.....))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))

Structure
                                                   cagagcua     g          a 
ugcuauuacaauugUGUCAGAAUGGUCGAUCAUUgagcagugcaagaggga        ugaag uuguauagcu u
|||||||||||||||||||||||||||||||||||||||||||||||||||        ||||| |||||||||| g
acgauaauguuaacACAGUCUUACCGGCUAGUGAcucgucacguucucccu        acuuc gauauguugg a
                                                   --------     -          a 


Annotation confidence Not enough data
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Genome context
JQCY02000418.1: 142094-142239 [+]

Database links

Mature sfr-miR-10454d-5p

Accession MIMAT0041808
Description Spodoptera frugiperda sfr-miR-10454d-5p mature miRNA
Sequence 15 - UGUCAGAAUGGUCGAUCAUU - 34
Evidence experimental
Illumina [1]

Mature sfr-miR-10454d-3p

Accession MIMAT0041809
Description Spodoptera frugiperda sfr-miR-10454d-3p mature miRNA
Sequence 113 - AGUGAUCGGCCAUUCUGACA - 132
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988