miRBase entry: sfr-mir-10466

Stem-loop sfr-mir-10466


Accession
MI0033560
Description
Spodoptera frugiperda sfr-mir-10466 precursor miRNA


Sequence

UAUAAUUAUCAGCACCGUCCAaaugucaaacacugauacuuuUGAGAGGUGCAGGUAAUUAUA
((((((((((.(((((.(((((((((((.....)))))..)))).))))))).))))))))))

Structure
          A     G  -    --     a 
UAUAAUUAUC GCACC UC CAaa  uguca a
|||||||||| ||||| || ||||  ||||| c
AUAUUAAUGG CGUGG AG GUuu  auagu a
          A     -  A    uc     c 


Annotation confidence Not enough data
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Genome context
JQCY02003144.1: 10758-10820 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from sfr-mir-10466
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sfr-miR-10466-5p

Accession MIMAT0041802
Description Spodoptera frugiperda sfr-miR-10466-5p mature miRNA
Sequence 1 - UAUAAUUAUCAGCACCGUCCA - 21
Evidence experimental
Illumina [1]

Mature sfr-miR-10466-3p

Accession MIMAT0041803
Description Spodoptera frugiperda sfr-miR-10466-3p mature miRNA
Sequence 43 - UGAGAGGUGCAGGUAAUUAUA - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988