miRBase entry: gma-MIR10436

Stem-loop gma-MIR10436


Accession
MI0033499
Description
Glycine max gma-MIR10436 precursor miRNA


Sequence

uaaagaaaaaUCUUGGCAACACAACUUUUAACAUgcucuuuugcacacauuuuuuauuauugguugaaauuuauugaaaaucacaaauuuuauggaucacaccucucauuuaaugacucuuguuccugauuuuauaguuuucaauaaauuucaaugagagaauguguauuaagagaaauguauuagagaauguguugcuaacacuucucuucuuuaa
(((((((.....(((((((((((.((((..((((.(((((....((((((((((......(.(((((((((((((((((((....((..(((.(((..(((....((((...))))....)))))))))..))...))))))))))))))))))).)))))))))))...)))))..))))...))))..)))))))))))........))))))).

Structure
-       ---aaaUC           -A    -UA    -g     uugc          uauuau g                   caca  uu   u   uc   ccuc    u 
 uaaagaa        UUGGCAACACA  CUUU   ACAU  cucuu    acacauuuuu      u guugaaauuuauugaaaau    aa  uua gga  aca    ucau  
 |||||||        |||||||||||  ||||   ||||  |||||    ||||||||||      | |||||||||||||||||||    ||  ||| |||  |||    |||| u
 auuucuu        aaucguugugu  gaga   ugua  gagaa    uguguaagag      a uaacuuuaaauaacuuuug    uu  agu ccu  ugu    agua  
a       cucuucac           aa    uua    aa     -uua          ------ g                   -aua  uu   -   --   ucuc    a 


Annotation confidence Not enough data
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Genome context
chr15: 31181524-31181740 [+]

Database links

Mature gma-miR10436

Accession MIMAT0041707
Description Glycine max gma-miR10436 mature miRNA
Sequence 11 - UCUUGGCAACACAACUUUUAACAU - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25747880
    Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
    "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
    "Plant Cell (2015) 27:546-562