Stem-loop gma-MIR4405b

Accession

MI0033454

Description

Glycine max gma-MIR4405b precursor miRNA

Literature search

1 open access papers mention gma-MIR4405b
(1 sentences)

Sequence

ccacccuaaaacauucuaagacgguuguucauaaccgccuuaaaauuugcguuguaaaaaucaauucucagcuuugauaauuacaaguuugccaccgcgucacuuuauaagguggUUCCGAAUAACCGACUUAGAAAUCgcgucguaaa
.............(((((((.(((((((((..((((((((((.((..((((((((((..(((((.........)))))..)))))...........))).))..)).))))))))))..))))))))).))))))).............

Structure

ccacccuaaaaca       a         au          a  uu  -   -----------     aa     uuc 
             uucuaag cgguuguuc  aaccgccuua aa  ug cgu           uguaa  aucaa   u
             ||||||| |||||||||  |||||||||| ||  || |||           |||||  |||||   c
             AAGAUUC GCCAAUAAG  UUgguggaau uu  ac gcg           acauu  uaguu   a
aaaugcugcgCUA       A         CC          a  uc  u   ccaccguuuga     aa     ucg 

Annotation confidence Not enough data

Genome context

chr4: 22567095-22567243 [+]

Mature gma-miR4405b

• Accession: MIMAT0041662
• Description: Glycine max gma-miR4405b mature miRNA
• Sequence: 116 - UUCCGAAUAACCGACUUAGAAAUC - 139
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562