Stem-loop gma-MIR10406a

Accession

MI0033433

Description

Glycine max gma-MIR10406a precursor miRNA

Sequence

aacacuacucaagaauuauacaauacccacgaccucacacuuauuuucaaacggguuuaucacacugugcuacaauuuaacgcuucaaguuccuaacuuggaaccuuacacuucuuuuaacacuuagcgcauaaacacuuuucucaagguaaacauCAGUCGAGUUAUUGUAUAAUUCACaacucacaac
............(((((((((((((....((((.......(((((((.....(((((((......(((((((....((((........(((((......)))))............))))....)))))))))))).))......)))))))......))))...)))))))))))))............

Structure

aacacuacucaa             ccca    cucacac       -caaac  -     ucacac       caau    ----cgcuucaa     ua 
            gaauuauacaaua    cgac       uuauuuu      gg guuua      ugugcua    uuaa            guucc  a
            |||||||||||||    ||||       |||||||      || |||||      |||||||    ||||            |||||   
            CUUAAUAUGUUAU    GCUG       aauggaa      uc caaau      acgcgau    aauu            caagg  c
caacacucaaCA             -UGA    -ACuaca       cucuuu  a     ------       ucac    uucuucacauuc     uu 

Annotation confidence Not enough data

Genome context

chr1: 9681298-9681487 [+]

Mature gma-miR10406a

• Accession: MIMAT0041641
• Description: Glycine max gma-miR10406a mature miRNA
• Sequence: 157 - CAGUCGAGUUAUUGUAUAAUUCAC - 180
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562