miRBase entry: gma-MIR10405a

Stem-loop gma-MIR10405a


Accession
MI0033431
Description
Glycine max gma-MIR10405a precursor miRNA


Sequence

auacucccuccuuuucuuuuuuaugagaaacaacuuuuucaguauaagaaauacauugaaacUUGUUUCUUAUAAAAAGGACCggagguagua
.((((.(((((...(((((((((((((((((((...(((((((((.....))))..))))).)))))))))))))))))))..))))).))))

Structure
a    c     uuu                   cuu     --    a 
 uacu ccucc   ucuuuuuuaugagaaacaa   uuuca  guau a
 |||| |||||   |||||||||||||||||||   |||||  |||| g
 auga ggagg   AGGAAAAAUAUUCUUUGUU   aaagu  caua a
-    u     -CC                   --c     ua    a 


Annotation confidence Not enough data
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Genome context
chr1: 3329190-3329282 [+]

Database links

Mature gma-miR10405a

Accession MIMAT0041639
Description Glycine max gma-miR10405a mature miRNA
Sequence 63 - UUGUUUCUUAUAAAAAGGACC - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25747880
    Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
    "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
    "Plant Cell (2015) 27:546-562