Stem-loop ssc-mir-330

Accession

MI0033402

Description

Sus scrofa ssc-mir-330 precursor miRNA

Sequence

13 reads, 24 reads per million, 7 experiments

cugccUCUCUGGGCCUGUGUCUUAGGCUcugcaagaucaaccgagcaaagcacacggccugcagagaggcag
(((((((((((((((((((.(((..((((.............)))).))))))).))))..)))))))))))

Structure

           --    -    U   AG    ugcaa 
cugccUCUCUG  GGCC UGUG CUU  GCUc     g
|||||||||||  |||| |||| |||  ||||     a
gacggagagac  ccgg acac gaa  cgag     u
           gu    c    -   -a    ccaac 

Annotation confidence Not enough data

Genome context

chrUScaf4186: 17724-17795 [-]

Mature ssc-miR-330

• Accession: MIMAT0041601
• Description: Sus scrofa ssc-miR-330 mature miRNA
• Sequence: 6 - UCUCUGGGCCUGUGUCUUAGGCU - 28
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25230983
   The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing
   "Pawlina K, Gurgul A, Oczkowicz M, Bugno-Poniewierska M"
   "J Appl Genet (2015) 56:239-252