miRBase entry: ssc-mir-10386

Stem-loop ssc-mir-10386


Accession
MI0033399
Description
Sus scrofa ssc-mir-10386 precursor miRNA


Sequence

109 reads, 195 reads per million, 9 experiments
cccGUCGUCCUCUCCCUCCCUCCUcuccggagggggaggggggggcccgcggcggg
((((((((((((((((((((.((((....))))))))))))))))...))))))))

Structure
        ---            U    u 
cccGUCGU   CCUCUCCCUCCC CCUc c
||||||||   |||||||||||| ||||  
gggcggcg   ggggggggaggg ggag c
        ccc            -    g 


Annotation confidence Not enough data
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Genome context
chr6: 870325-870380 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ssc-mir-10386
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ssc-miR-10386

Accession MIMAT0041598
Description Sus scrofa ssc-miR-10386 mature miRNA
Sequence 4 - GUCGUCCUCUCCCUCCCUCCU - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25230983
    The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing
    "Pawlina K, Gurgul A, Oczkowicz M, Bugno-Poniewierska M"
    "J Appl Genet (2015) 56:239-252