miRBase entry: cgr-mir-497b

Stem-loop cgr-mir-497b


Accession
MI0033095
Description
Cricetulus griseus cgr-mir-497b precursor miRNA


Sequence

13620 reads, 124 reads per million, 6 experiments
ucagcggugccucccccacccucgcucuaaCACCACAGUGUGGUUUGGACGUGGccacagugccguacaaaccacagugugcugcuggggcgggagcaggacuuggauggguugagaggaagaca
.........((((((((((((((((((((.((.((((.(((((((((.(((..((....))..))).))))))))).)))).)).)))))))))..........)).))))..).))))......

Structure
ucagcggug    - --    -  ----------         a  C    G         G   UG  c 
         ccuc c  ccca cc          cucgcucua CA CACA UGUGGUUUG ACG  Gc a
         |||| |  |||| ||          ||||||||| || |||| ||||||||| |||  ||  
         ggag g  gggu gg          gggcggggu gu gugu acaccaaac ugc  ug c
---acagaa    a uu    a  uucaggacga         c  c    g         a   cg  a 


Annotation confidence Low
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Genome context
JH000064.1: 2276413-2276537 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from cgr-mir-497b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cgr-miR-497b

Accession MIMAT0041165
Description Cricetulus griseus cgr-miR-497b mature miRNA
Sequence 31 - CACCACAGUGUGGUUUGGACGUGG - 54
Evidence not_experimental

References

  1. PubMed ID: 25689160
    Annotation of additional evolutionary conserved microRNAs in CHO cells from updated genomic data
    "Diendorfer AB, Hackl M, Klanert G, Jadhav V, Reithofer M, Stiefel F, Hesse F, Grillari J, Borth N"
    "Biotechnol Bioeng (2015) 112:1488-1493