miRBase entry: gma-MIR10189

Stem-loop gma-MIR10189


Accession
MI0032954
Description
Glycine max gma-MIR10189 precursor miRNA


Sequence

aacaaauuguuguugcgugguucuguugaauuuuuuaugcaaauucaucauugggugaauauucucuagacgcuauuggaacacguauuuggAAGAACACUAGAACCAUCUCCaaaaucuggc
..((.(((.(((..(.(((((((((.((..((((..((((..(((((((....)))))))....((((........))))....))))..))))...)).))))))))))..)))))).))..

Structure
aa  a   g   uu c         u  -aa    uu    ----------------------aa       a 
  ca auu uug  g gugguucug ug   uuuu  augc                        auucauc u
  || ||| |||  | ||||||||| ||   ||||  ||||                        |||||||  
  gu uaa aaC  C UACCAAGAU AC   AAgg  uaug                        uaagugg u
cg  c   -   CU -         C  AAG    uu    cacaagguuaucgcagaucucuua       g 


Annotation confidence Not enough data
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Genome context
chr10: 42439209-42439331 [+]

Database links

Mature gma-miR10189

Accession MIMAT0040954
Description Glycine max gma-miR10189 mature miRNA
Sequence 93 - AAGAACACUAGAACCAUCUCC - 113
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25465409
    An atlas of soybean small RNAs identifies phased siRNAs from hundreds of coding genes
    "Arikit S, Xia R, Kakrana A, Huang K, Zhai J, Yan Z, Valdes-Lopez O, Prince S, Musket TA, Nguyen HT, Stacey G, Meyers BC"
    "Plant Cell (2014) 26:4584-4601