miRBase entry: hpo-mir-87a

Stem-loop hpo-mir-87a


Accession
MI0032698
Description
Heligmosomoides polygyrus hpo-mir-87a precursor miRNA

Literature search
1 open access papers mention hpo-mir-87a
(1 sentences)

Sequence

CGCCUGAACCUUUCGUCUCAACCUcuaugucaggcagGUGAGCAAAGUUUCAGGUGUGC
((((((((.((((.(.((((.(((((......)).)))))))))))).))))))))...

Structure
---        C    C U    A   -  au 
   CGCCUGAA CUUU G CUCA CCU cu  g
   |||||||| |||| | |||| ||| ||   
   GUGGACUU GAAA C GAGU Gga gg  u
CGU        U    - -    -   c  ac 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_25225: 580-638 [-]

Database links

Mature hpo-miR-87a-5p

Accession MIMAT0040482
Description Heligmosomoides polygyrus hpo-miR-87a-5p mature miRNA
Sequence 1 - CGCCUGAACCUUUCGUCUCAACCU - 24
Evidence experimental
Illumina [1]

Mature hpo-miR-87a-3p

Accession MIMAT0040483
Description Heligmosomoides polygyrus hpo-miR-87a-3p mature miRNA
Sequence 38 - GUGAGCAAAGUUUCAGGUGUGC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488