miRBase entry: pal-let-7i

Stem-loop pal-let-7i


Accession
MI0032327
Description
Pteropus alecto pal-let-7i precursor miRNA

Literature search
1 open access papers mention pal-let-7i
(1 sentences)

Sequence

UGAGGUAGUAGUUUGUGCUGUUggucggguugugacauugcccgcuguggagauaaCUGCGCAAGCUACUGCCUUG
.(((((((((((((((((.(((((.(((((.........)))))))........))).))))))))))))))))).

Structure
U                 U   --------  u     ugu 
 GAGGUAGUAGUUUGUGC GUU        gg cgggu   g
 ||||||||||||||||| |||        || |||||   a
 UUCCGUCAUCGAACGCG Caa        uc gcccg   c
G                 U   uagaggug  -     uua 


Annotation confidence Not enough data
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Genome context
KB031122.1: 2049265-2049340 [+]

Database links

Mature pal-let-7i-5p

Accession MIMAT0039786
Description Pteropus alecto pal-let-7i-5p mature miRNA
Sequence 1 - UGAGGUAGUAGUUUGUGCUGUU - 22
Evidence experimental
Illumina [1]

Mature pal-let-7i-3p

Accession MIMAT0039787
Description Pteropus alecto pal-let-7i-3p mature miRNA
Sequence 57 - CUGCGCAAGCUACUGCCUUG - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682