miRBase entry: pal-mir-378

Stem-loop pal-mir-378


Accession
MI0032325
Description
Pteropus alecto pal-mir-378 precursor miRNA

Literature search
1 open access papers mention pal-mir-378
(1 sentences)

Sequence

CUCCUGACUACAGGUCCUGUGUguuaccucgaaauagcACUGGACUUGGAGUCAGAAGGC
((.((((((.(((((((.((((..(........)..)))).))))))).)))))).))..

Structure
--  C      A       U    gu acc 
  CU CUGACU CAGGUCC GUGU  u   u
  || |||||| ||||||| ||||  |    
  GA GACUGA GUUCAGG CAcg  a   c
CG  A      G       U    au aag 


Annotation confidence Not enough data
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Genome context
KB030406.1: 1555836-1555895 [+]

Database links

Mature pal-miR-378-5p

Accession MIMAT0039782
Description Pteropus alecto pal-miR-378-5p mature miRNA
Sequence 1 - CUCCUGACUACAGGUCCUGUGU - 22
Evidence experimental
Illumina [1]

Mature pal-miR-378-3p

Accession MIMAT0039783
Description Pteropus alecto pal-miR-378-3p mature miRNA
Sequence 39 - ACUGGACUUGGAGUCAGAAGGC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682