miRBase entry: rno-mir-486

Stem-loop rno-mir-486


Accession
MI0031787
Description
Rattus norvegicus rno-mir-486 precursor miRNA
Gene family
MIPF0000220; mir-486

Literature search
15 open access papers mention rno-mir-486
(135 sentences)

Sequence

19731169 reads, 6534 reads per million, 505 experiments
gcaUCCUGUACUGAGCUGCCCCGAGcugagcacaaugaaggaccucggggcagcucaguacaggaccc
...((((((((((((((((((((((((...........))...))))))))))))))))))))))...

Structure
gca                      ---  gagc 
   UCCUGUACUGAGCUGCCCCGAG   cu    a
   ||||||||||||||||||||||   ||    c
   aggacaugacucgacggggcuc   ga    a
ccc                      cag  agua 


Annotation confidence High
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature rno-miR-486

Accession MIMAT0037265
Description Rattus norvegicus rno-miR-486 mature miRNA
Sequence 4 - UCCUGUACUGAGCUGCCCCGAG - 25
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23799049
    Distinctive profile of IsomiR expression and novel microRNAs in rat heart left ventricle
    McGahon MK, Yarham JM, Daly A, Guduric-Fuchs J, Ferguson LJ, Simpson DA, Collins A
    PLoS One (2013) 8:e65809