Stem-loop rno-mir-1b

Accession

MI0031785

Description

Rattus norvegicus rno-mir-1b precursor miRNA

Gene family

MIPF0000038; mir-1

Literature search

4 open access papers mention rno-mir-1b
(12 sentences)

Sequence

319448 reads, 374 reads per million, 382 experiments

ccugcuugggacacauacuucuuuauaugcccauauggaccugcuaagcuaUGGAAUGUAAAGAAGUAUGUAUuucaggcuagga
(((((((((((.((((((((((((((((..((((((((.....)))...))))).)))))))))))))))).)))))))).))).

Structure

-   -        c                gc     ---   a 
 ccu gcuuggga acauacuucuuuauau  ccaua   ugg c
 ||| |||||||| ||||||||||||||||  |||||   ||| c
 gga cggacuuU UGUAUGAAGAAAUGUA  GGUau   auc u
a   u        A                -A     cga   g 

Annotation confidence High

Genome context

chr3: 175769716-175769800 [+]

Mature rno-miR-1b

• Accession: MIMAT0037263
• Description: Rattus norvegicus rno-miR-1b mature miRNA
• Sequence: 52 - UGGAAUGUAAAGAAGUAUGUAU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23799049
   Distinctive profile of IsomiR expression and novel microRNAs in rat heart left ventricle
   McGahon MK, Yarham JM, Daly A, Guduric-Fuchs J, Ferguson LJ, Simpson DA, Collins A
   PLoS One (2013) 8:e65809