Stem-loop sequence rno-mir-6319-2

Accession

MI0031776 (change log)

Description

Rattus norvegicus miR-6319-2 stem-loop

Gene family

MIPF0002088; mir-6319

Stem-loop

   ---ucagaaauacucagcaguguua       u      a          g   ugcc      aa 
5'                          gaggagc ggauuc cagggcagug aga    gagagg  u
                            ||||||| |||||| |||||||||| |||    ||||||   
3'                          cuucucg ccugag gucucgucgc ucu    cuuucc  g
   acaagugagacggcuacuucuuuga       u      -          -   --ua      ga 

Deep sequencing

722 reads, 0 reads per million, 239 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Rnor_6.0; GCA_000001895.4): chr17: 35477422-35477548 [+]
• Overlapping transcripts:

  sense

  ENSRNOT00000040371 ; Exoc2-201; intron 9

Database links

• miRBase Tracker:MI0031776

Mature sequence rno-miR-6319

• Accession: MIMAT0025056
• Sequence: 72 - ucauucucgcugcucuggagu - 92
• Deep sequencing: 1414 reads, 235 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:22908386 "MicroRNAs in the pineal gland: miR-483 regulates melatonin synthesis by targeting arylalkylamine N-acetyltransferase" Clokie SJ, Lau P, Kim HH, Coon SL, Klein DC J Biol Chem. 287:25312-25324(2012).