miRBase entry: rno-mir-6317-2

Stem-loop rno-mir-6317-2


Accession
MI0031775
Description
Rattus norvegicus rno-mir-6317-2 precursor miRNA
Gene family
MIPF0002112; mir-6317


Sequence

44 reads, 6 reads per million, 41 experiments
aaagaccucuagucuccugcuugccuucugcugcaGUGAACCUGAGAGAAAGGCUCgagcaauuagguuggggccuuacucacagucucacuggagacaucggguuauucuagguggauucagaagg
.....((((((((((((((...((((..((((.((((((..(((.(((.(((((((.(((......))).))))))).))).)))..)))))).)).))..)))).....)))).))))).)).)))

Structure
aaaga   -  -     -    --cuu    uc  -  g      AC   A   A       g   aa 
     ccu cu agucu ccug     gccu  ug cu caGUGA  CUG GAG AAGGCUC agc  u
     ||| || ||||| ||||     ||||  || || ||||||  ||| ||| ||||||| |||   
     gga ga uuagg ggau     uggg  ac ga gucacu  gac cuc uuccggg uug  u
-----   a  c     u    cuuau    cu  a  g      cu   a   a       g   ga 


Annotation confidence Not enough data
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Genome context
chr1: 259665468-259665594 [-]

Database links

Mature rno-miR-6317

Accession MIMAT0025054
Description Rattus norvegicus rno-miR-6317 mature miRNA
Sequence 36 - GUGAACCUGAGAGAAAGGCUC - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22908386
    MicroRNAs in the pineal gland: miR-483 regulates melatonin synthesis by targeting arylalkylamine N-acetyltransferase
    "Clokie SJ, Lau P, Kim HH, Coon SL, Klein DC"
    "J Biol Chem (2012) 287:25312-25324