Stem-loop rno-mir-3084a-4

Accession

MI0031762

Description

Rattus norvegicus rno-mir-3084a-4 precursor miRNA

Gene family

MIPF0001536; mir-3084

Literature search

1 open access papers mention rno-mir-3084a-4
(6 sentences)

Sequence

3106 reads, 70 reads per million, 344 experiments

cacauaGUUGAAGGUUAAUUAGCAGAGUaacugcauauaguaaUUCUGCCAGUCCCCUUCAGACAaaaa
.......(((((((...(((.(((((((.((((....)))).))))))).)))..))))))).......

Structure

cacauaG       UUA   A       a    c 
       UUGAAGG   AUU GCAGAGU acug a
       |||||||   ||| ||||||| ||||  
       GACUUCC   UGA CGUCUUa ugau u
aaaaACA       -CC   C       a    a 

Annotation confidence High

Genome context

chr6: 91645144-91645212 [-]

Mature rno-miR-3084a-3p

• Accession: MIMAT0035740
• Description: Rattus norvegicus rno-miR-3084a-3p mature miRNA
• Sequence: 44 - UUCUGCCAGUCCCCUUCAGACA - 65
• Evidence: experimental ; RNAseq-metaanalysis [1]

Mature rno-miR-3084a-5p

• Accession: MIMAT0035741
• Description: Rattus norvegicus rno-miR-3084a-5p mature miRNA
• Sequence: 7 - GUUGAAGGUUAAUUAGCAGAGU - 28
• Evidence: experimental ; RNAseq-metaanalysis [1]

References

1. PubMed ID: 23329697
   Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters
   "Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A"
   "RNA (2013) 19:365-379