miRBase entry: crm-mir-51-2

Stem-loop crm-mir-51-2

Accession

MI0031744

Description

Caenorhabditis remanei crm-mir-51-2 precursor miRNA

Gene family

MIPF0000268; mir-51

Sequence

UACCCGUAGCUCCUAUCCAUGUUacuagcagauagagugaacauggaaguugguacaggugua
((((.(((.(..((.(((((((((((.........)))).)))))))))..).))).))))..

Structure

--    C   G UC  A       -    agc 
  UACC GUA C  CU UCCAUGU Uacu   a
  |||| ||| |  || ||||||| ||||   g
  gugg cau g  ga agguaca guga   a
au    a   g uu  -       a    gau

Annotation confidence Not enough data

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Genome context

Crem_Contig20: 698366-698428 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from crm-mir-51-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature crm-miR-51

Accession	MIMAT0029636
Description	Caenorhabditis remanei crm-miR-51 mature miRNA
Sequence	1 - UACCCGUAGCUCCUAUCCAUGUU - 23
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508