miRBase entry: ath-MIR8167f

Stem-loop ath-MIR8167f


Accession
MI0031741
Description
Arabidopsis thaliana ath-MIR8167f precursor miRNA
Gene family
MIPF0001897; MIR8167


Sequence

caucuuugagauuuuacacaguagucauggaguuuuuggaagagagaaaguggAGAUGUGGAGAUCGUGGGGAUG
((((((((.((((((.((((....((((....(((((.....)))))..))))...)))))))))).))))))))

Structure
        a      a    guag    ggag     g 
caucuuug gauuuu caca    ucau    uuuuu g
|||||||| |||||| ||||    ||||    ||||| a
GUAGGGGU CUAGAG GUGU    ggug    agaga a
        G      -    -AGA    --aa     g 


Annotation confidence Not enough data
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Genome context
chr5: 24002239-24002313 [-]

Database links

Mature ath-miR8167f

Accession MIMAT0037261
Description Arabidopsis thaliana ath-miR8167f mature miRNA
Sequence 54 - AGAUGUGGAGAUCGUGGGGAUG - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24119003
    Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots
    Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutiérrez RA
    BMC Genomics (2013) 14:701