miRBase entry: ata-MIR9783

Stem-loop ata-MIR9783


Accession
MI0031726
Description
Aegilops tauschii ata-MIR9783 precursor miRNA
Gene family
MIPF0001947; MIR9783


Sequence

aaaccgaauuuuuUUUGAAGCACUGACGCCUAUUUCUauaggagagacgcccaauuaagcgucugccuuauacaaAUAAGCACCGGUGCUUAAGGAaagccugguu
.(((((..((((((((((.((((((..((.(((((.((((((..((((((........))))))..)))))).))))).))..))))))))))))))))..)))))

Structure
a     aa          A      AC  C     C      ag      cca 
 aaccg  uuuuuUUUGA GCACUG  GC UAUUU Uauagg  agacgc   a
 |||||  |||||||||| ||||||  || ||||| ||||||  ||||||    
 uuggu  gaaAGGAAUU CGUGGC  CG AUAaa auauuc  ucugcg   u
-     cc          -      CA  A     c      cg      aau 


Annotation confidence Not enough data
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Genome context
chr4: 388404643-388404748 [+]

Database links

Mature ata-miR9783-5p

Accession MIMAT0037246
Description Aegilops tauschii ata-miR9783-5p mature miRNA
Sequence 14 - UUUGAAGCACUGACGCCUAUUUCU - 37
Evidence experimental
Illumina [1]

Mature ata-miR9783-3p

Accession MIMAT0037247
Description Aegilops tauschii ata-miR9783-3p mature miRNA
Sequence 76 - AUAAGCACCGGUGCUUAAGGA - 96
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23535592
    Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
    "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
    "Nature (2013) 496:91-95