Stem-loop ata-MIR9863b

Accession

MI0031721

Description

Aegilops tauschii ata-MIR9863b precursor miRNA

Gene family

MIPF0001998; MIR9863

Sequence

uugucgcucaauUGUUAUGAUCUGCUUCUCAUCugaagacuaguuuauuacauauaagcauauuuuugaaaguuugagagagagaucacaagcagaucccgugcagaagggaacaucauugcuacaacuacaauaauucuuccacuucaagagccauuggaccgcuaaacaagucuuuagaUGAGAAGGUAGAUCAUAAUAGCugagcgaaau
...(((((((.((((((((((((((((((((((((((((((.(((((.........((((...........(((((.((......)).)))))...((((........)))).......)))).......((((..(((((.......)))))..))))......))))).)))))))))))))))).)))))))))))))).)))))))...

Structure

uug       a              -                a     uuacauauaagcauauuuuugaaaguuugagagagagaucacaagcagaucccgugcagaagggaacaucauugcuacaacua    aa     cc 
   ucgcuca uUGUUAUGAUCUGC UUCUCAUCugaagacu guuua                                                                                   caau  uucuu  a
   ||||||| |||||||||||||| |||||||||||||||| |||||                                                                                   ||||  |||||  c
   agcgagu GAUAAUACUAGAUG AAGAGUagauuucuga caaau                                                                                   guua  gagaa  u
uaa       C              G                a     -----------------------------------------------------------------------------cgccag    cc     cu 

Annotation confidence Not enough data

Genome context

chr1: 68987739-68987951 [+]

Mature ata-miR9863b-5p

• Accession: MIMAT0037236
• Description: Aegilops tauschii ata-miR9863b-5p mature miRNA
• Sequence: 13 - UGUUAUGAUCUGCUUCUCAUC - 33
• Evidence: experimental ; Illumina [1]

Mature ata-miR9863b-3p

• Accession: MIMAT0037237
• Description: Aegilops tauschii ata-miR9863b-3p mature miRNA
• Sequence: 182 - UGAGAAGGUAGAUCAUAAUAGC - 203
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95