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miRBase |
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Stem-loop sequence ata-MIR172c |
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Accession | MI0031714 (change log) | ||||
Description | Aegilops tauschii miR172c stem-loop | ||||
Gene family | MIPF0000035; MIR172 | ||||
Literature search |
1 open access papers mention ata-MIR172c | ||||
Stem-loop |
-- u ug a --au --- ----au u u - - u cca c u u 5' gauu cuggug gcaucaucaagauuc caca gua uggc gca gcga gcuc uca ucc ucc uccaugcaug aug gaac g |||| |||||| ||||||||||||||| |||| ||| |||| ||| |||| |||| ||| ||| ||| |||||||||| ||| |||| 3' cuag ggcuac cguaguaguucuaag gugu cau accg cgu cguu cgag agu agg agg agguacguac ugc cuug u aa u gu g guau gcg aucgcu u - u u u uag u - a |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence ata-miR172c-5p |
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Accession | MIMAT0037222 |
Sequence |
11 - guggcaucaucaagauucacaca - 33 |
Evidence | experimental; Illumina [1] |
Mature sequence ata-miR172c-3p |
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Accession | MIMAT0037223 |
Sequence |
163 - ggaaucuugaugaugcugcau - 183 |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:23535592
"Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation"
Nature. 496:91-95(2013).
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