Stem-loop sequence ata-MIR396d

AccessionMI0031683 (change log)
DescriptionAegilops tauschii miR396d stem-loop
Gene family MIPF0000047; MIR396
Literature search

1 open access papers mention ata-MIR396d
(1 sentences)

Stem-loop 
   --       cuc    ca                g   uc          ggauu  cu   uugu    c 
5'   gggcaug   ucca  ggcuuucuugaacugu aac  gcggggaugg     cc  gga    ggcg u
     |||||||   ||||  |||||||||||||||| |||  ||||||||||     ||  |||    ||||  
3'   cccguac   aggu  ccgaaagaacuuggua uug  cgccucugcc     gg  ucu    ccgu c
   cg       caa    ac                g   uc          -----  cu   -cuu    c
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM34733v2; GCA_000347335.2) Overlapping transcripts
chr2: 543706926-543707061 [-]
intergenic
Database links

Mature sequence ata-miR396d-5p

Accession MIMAT0037160
Sequence

11 -  

uccacaggcuuucuugaacug

 - 31

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Evidence experimental; Illumina [1]

Mature sequence ata-miR396d-3p

Accession MIMAT0037161
Sequence

106 -  

guucaagaaagcccauggaaa

 - 126

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:23535592 "Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation" Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu Nature. 496:91-95(2013).