Stem-loop ata-MIR166e

Accession

MI0031663

Description

Aegilops tauschii ata-MIR166e precursor miRNA

Gene family

MIPF0000004; MIR166

Literature search

1 open access papers mention ata-MIR166e
(1 sentences)

Sequence

gcaguugaggGGAAUGUUGUCUGGUUGGAGAccuggcucgcacgacggaucgaucggcggcgggcgugcgcgcgcgguuUCGGACCAGGCUUCAUUCCCCccaacucaac
(.(((((.((((((((..((((((((.((((((..((.((((((.(.(.(((.....)))).).)))))).))..)))))).))))))))..)))))))).))))))...

Structure

--- c     a        UU        G      ug  u      a g a   a 
   g aguug ggGGAAUG  GUCUGGUU GAGAcc  gc cgcacg c g ucg u
   | ||||| ||||||||  |||||||| ||||||  || |||||| | | ||| c
   c ucaac CCCCUUAC  CGGACCAG CUuugg  cg gcgugc g c ggc g
caa -     c        UU        G      cg  c      g g -   g 

Annotation confidence Not enough data

Genome context

chr4: 351373188-351373297 [+]

Mature ata-miR166e-5p

• Accession: MIMAT0037120
• Description: Aegilops tauschii ata-miR166e-5p mature miRNA
• Sequence: 11 - GGAAUGUUGUCUGGUUGGAGA - 31
• Evidence: experimental ; Illumina [1]

Mature ata-miR166e-3p

• Accession: MIMAT0037121
• Description: Aegilops tauschii ata-miR166e-3p mature miRNA
• Sequence: 80 - UCGGACCAGGCUUCAUUCCCC - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95