Stem-loop sequence ata-MIR169e

AccessionMI0031660 (change log)
DescriptionAegilops tauschii miR169e stem-loop
Gene family MIPF0000037; MIR169_2
Literature search

1 open access papers mention ata-MIR169e
(1 sentences)

Stem-loop 
   -   ug aa  c           -        a  --------  a   aa 
5'  gag  g  ug agccaaggaug acuugccg ca        gc cac  c
    |||  |  || ||||||||||| |||||||| ||        || |||   
3'  cuc  u  ac ucgguuccugc ugaacggc gu        ug gug  a
   u   gu cc  a           c        c  ucuaauga  -   ga
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM34733v2; GCA_000347335.2) Overlapping transcripts
chr2: 452091058-452091150 [+]
intergenic
Clustered miRNAs
< 10kb from ata-MIR169e
ata-MIR169dchr2: 452086951-452087051 [+]
ata-MIR169echr2: 452091058-452091150 [+]
Database links

Mature sequence ata-miR169e-5p

Accession MIMAT0037115
Sequence

11 -  

cagccaaggaugacuugccga

 - 31

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Evidence experimental; Illumina [1]

References

1
PMID:23535592 "Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation" Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu Nature. 496:91-95(2013).