Stem-loop sequence ata-MIR166a

AccessionMI0031658 (change log)
DescriptionAegilops tauschii miR166a stem-loop
Gene family MIPF0000004; MIR166
Literature search

1 open access papers mention ata-MIR166a
(1 sentences)

Stem-loop 
   --gc       u      uu         a     uc  ucu  --u     -  -ug   a 
5'     uucuggg ggaaug  gucugguuc agguc  gc   gg   uugag ga   gaa c
       ||||||| ||||||  ||||||||| |||||  ||   ||   ||||| ||   |||  
3'     gagacuc ccuuac  cggaccagg ucuag  cg   cc   gacuc cu   cuu c
   gaua       c      uu         c     --  --u  uuc     u  uua   u
Get sequence
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (ASM34733v2; GCA_000347335.2) Overlapping transcripts
chr1: 255093018-255093133 [+]
intergenic
Database links

Mature sequence ata-miR166a-5p

Accession MIMAT0037112
Sequence

11 -  

ggaauguugucugguucaagg

 - 31

Get sequence
Evidence experimental; Illumina [1]

Mature sequence ata-miR166a-3p

Accession MIMAT0037113
Sequence

86 -  

ucggaccaggcuucauucccc

 - 106

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:23535592 "Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation" Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu Nature. 496:91-95(2013).