Stem-loop ata-MIR167a

Accession

MI0031648

Description

Aegilops tauschii ata-MIR167a precursor miRNA

Gene family

MIPF0000023; MIR167_1

Literature search

1 open access papers mention ata-MIR167a
(12 sentences)

Sequence

agagaaagcgUGAAGCUGCCAGCAUGAUCUAacucuugaaccagcuagcuuccgcggggugguuaGAUCGUGCUGUGACAGUUUCACCcuuucccugu
((.(((((.(((((((((((((((((((((((((.....(((.((........))..)))))))))))))))))).).))))))))).))))).))..

Structure

--  a     c         - -               cuuga   -a  uag 
  ag gaaag gUGAAGCUG C CAGCAUGAUCUAacu     acc  gc   c
  || ||||| ||||||||| | |||||||||||||||     |||  ||    
  uc cuuuc CACUUUGAC G GUCGUGCUAGauugg     ugg  cg   u
ug  c     C         A U               -----   gg  ccu 

Annotation confidence Not enough data

Genome context

chr5: 355725741-355725838 [-]

Mature ata-miR167a-5p

• Accession: MIMAT0037092
• Description: Aegilops tauschii ata-miR167a-5p mature miRNA
• Sequence: 11 - UGAAGCUGCCAGCAUGAUCUA - 31
• Evidence: experimental ; Illumina [1]

Mature ata-miR167a-3p

• Accession: MIMAT0037093
• Description: Aegilops tauschii ata-miR167a-3p mature miRNA
• Sequence: 66 - GAUCGUGCUGUGACAGUUUCACC - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95