Stem-loop ata-MIR169g

Accession

MI0031645

Description

Aegilops tauschii ata-MIR169g precursor miRNA

Gene family

MIPF0000037; MIR169_2

Literature search

1 open access papers mention ata-MIR169g
(1 sentences)

Sequence

gacuauggugCAGCCAAGGAUGACUUGCCGAucgaacaaugauacaucaucauaucauauacauugauccaucGGCGAGUUGUUCUUGGCUACAucuuagcu
..(((.((((.(((((((((((((((((((((.((.((((((((.............))).))))).)).))))))))))))))))))))).)))).)))..

Structure

ga   u    C                     c  a     -   cauca 
  cua ggug AGCCAAGGAUGACUUGCCGAu ga caaug aua     u
  ||| |||| ||||||||||||||||||||| || ||||| |||     c
  gau cuAC UCGGUUCUUGUUGAGCGGcua cu guuac uau     a
uc   u    A                     c  a     a   acuau 

Annotation confidence Not enough data

Genome context

chr3: 163502916-163503017 [+]

Mature ata-miR169g-5p

• Accession: MIMAT0037086
• Description: Aegilops tauschii ata-miR169g-5p mature miRNA
• Sequence: 11 - CAGCCAAGGAUGACUUGCCGA - 31
• Evidence: experimental ; Illumina [1]

Mature ata-miR169g-3p

• Accession: MIMAT0037087
• Description: Aegilops tauschii ata-miR169g-3p mature miRNA
• Sequence: 74 - GGCGAGUUGUUCUUGGCUACA - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95