miRBase entry: ssc-mir-9845-6

Stem-loop ssc-mir-9845-6


Accession
MI0031619
Description
Sus scrofa ssc-mir-9845-6 precursor miRNA
Gene family
MIPF0001900; mir-9845


Sequence

cacuagggccUGAACCCAGAUCGGCCCGGGguccuuugugugcaggcacgccccccugggucucacuguggccaggccacagca
..((..((((((..(((((...(((((((((.....(((((....)))))...)))))))))...))).)).))))))..))..

Structure
ca  ag      AA  -   AUC         uccuu     g 
  cu  ggccUG  CC CAG   GGCCCGGGg     ugugu c
  ||  ||||||  || |||   |||||||||     |||||  
  ga  ccggac  gg guc   cuggguccc     gcacg a
ac  ca      -c  u   acu         --ccc     g 


Annotation confidence Not enough data
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Genome context
chr17: 69661596-69661679 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ssc-mir-9845-6
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ssc-miR-9845-5p

Accession MIMAT0037063
Description Sus scrofa ssc-miR-9845-5p mature miRNA
Sequence 11 - UGAACCCAGAUCGGCCCGGG - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100