Stem-loop ssc-mir-9822

Accession

MI0031589

Description

Sus scrofa ssc-mir-9822 precursor miRNA

Sequence

cauggggccgaagcucuccuccgacggacagacagacccggcuGCCUGGAUGGAUCAGAGGACACCuccacuccgu
.((((((..((.(...(((((.((((..(((.(((......))).)))..))..)).)))))...)))..))))))

Structure

c      cc  a cuc     c  --  ga   a   ac 
 augggg  ga g   uccuc ga  cg  cag cag  c
 ||||||  || |   ||||| ||  ||  ||| |||   
 ugccuc  cu C   AGGAG CU  GU  GUC Guc  c
-      ac  - CAC     A  AG  AG   C   gg 

Annotation confidence Not enough data

Genome context

chr1: 302681896-302681971 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ssc-mir-9822

Mature ssc-miR-9822-3p

• Accession: MIMAT0037040
• Description: Sus scrofa ssc-miR-9822-3p mature miRNA
• Sequence: 44 - GCCUGGAUGGAUCAGAGGACACC - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100