miRBase entry: ssc-mir-9821

Stem-loop ssc-mir-9821


Accession
MI0031588
Description
Sus scrofa ssc-mir-9821 precursor miRNA


Sequence

augcgugagaGCCUGGAUACGGCCGGACACCagggucgccgucugcucggccacgguccgccuugcugcgcccucacgagc
...((((((.((.(((.((.(((.((((.(....((.((((......)))).)))))))))).))))).)).))))))...

Structure
aug      a  C   A  C   C    A Cagg  c    uc 
   cgugag GC UGG UA GGC GGAC C    gu gccg  u
   |||||| || ||| || ||| |||| |    || ||||   
   gcacuc cg guc gu ccg ccug g    ca cggc  g
cga      c  c   -  u   -    - ----  c    uc 


Annotation confidence Not enough data
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Genome context
chr1: 2600232-2600312 [-]

Database links

Mature ssc-miR-9821-5p

Accession MIMAT0037039
Description Sus scrofa ssc-miR-9821-5p mature miRNA
Sequence 11 - GCCUGGAUACGGCCGGACACC - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100