miRBase entry: ssc-mir-9819

Stem-loop ssc-mir-9819


Accession
MI0031586
Description
Sus scrofa ssc-mir-9819 precursor miRNA


Sequence

ucuuuagaggGAGCUCGAUCGUCCGGAUGCUCagccugggacguccccccgccgccccggggccagagcagagcugggggcugcagccuagcagggaa
(((((.(..((.(((((...((((....((((.((((((.......(((((......))))))))).)).))))...)))))).)))))..)))))).

Structure
-     a ag  A   -  AUC    GGAU    a  -    gacgucc     cc 
 ucuuu g  gG GCU CG   GUCC    GCUC gc cugg       ccccg  g
 ||||| |  || ||| ||   ||||    |||| || ||||       |||||   
 aggga c  uc cga gu   cggg    cgag cg gacc       ggggc  c
a     - ga  -   c  ---    -ggu    a  a    -------     cc 


Annotation confidence Not enough data
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Genome context
chr5: 8348858-8348955 [-]

Database links

Mature ssc-miR-9819-5p

Accession MIMAT0037037
Description Sus scrofa ssc-miR-9819-5p mature miRNA
Sequence 11 - GAGCUCGAUCGUCCGGAUGCUC - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100