Stem-loop ssc-mir-9796

Accession

MI0031560

Description

Sus scrofa ssc-mir-9796 precursor miRNA

Sequence

1 reads, 4 reads per million, 1 experiments

gggcauuuuaggcgguuccguuaugaggaaguggccggacccgaagaggcgcugagccggcuCAGGGAACUUUGUCGUCGGUggcugaggcc
.(((..(((((.((...(((..((((.(((((..((.((.((.....(((.....))))).)).))..))))).))))))))).))))))))

Structure

g   au     g  guu   uu    g     gg  g  c  gaaga   g 
 ggc  uuuag cg   ccg  auga gaagu  cc ga cc     ggc c
 |||  ||||| ||   |||  |||| |||||  || || ||     ||| u
 ccg  gaguc gU   GGC  UGCU UUUCA  GG Cu gg     ccg g
-   --     g  ---   --    G     AG  A  c  -----   a 

Annotation confidence Not enough data

Genome context

chr3: 6616431-6616522 [+]

Mature ssc-miR-9796-3p

• Accession: MIMAT0037014
• Description: Sus scrofa ssc-miR-9796-3p mature miRNA
• Sequence: 63 - CAGGGAACUUUGUCGUCGGU - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100