Stem-loop sequence tae-MIR9774

Accession

MI0031527 (change log)

Description

Triticum aestivum miR9774 stem-loop

Literature search

2 open access papers mention tae-MIR9774
(2 sentences)

Stem-loop

                           cu 
5' aagacagaaauacccaauaucuug  a
   ||||||||||||||||||||||||   
3' uucugucuuuauggguuauagaac  g
                           aa 

Deep sequencing

73543 reads, 125 reads per million, 116 experiments

Confidence

Annotation confidence: not enough data

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Comments

This sequence was incorrectly named MIR2007 in [1].

Genome context

Coordinates	Overlapping transcripts
1B: 89459479-89459532 [+]	intergenic
1B: 154254422-154254475 [-]	intergenic
4D: 97215455-97215508 [-]	intergenic

Database links

• miRBase Tracker:MI0031527

Mature sequence tae-miR9774

• Accession: MIMAT0036985
• Sequence: 31 - caagauauuggguauuucuguc - 52
• Deep sequencing: 41128 reads, 116 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:19499258 "Novel microRNAs uncovered by deep sequencing of small RNA transcriptomes in bread wheat (Triticum aestivum L.) and Brachypodium distachyon (L.) Beauv" Wei B, Cai T, Zhang R, Li A, Huo N, Li S, Gu YQ, Vogel J, Jia J, Qi Y, Mao L Funct Integr Genomics. 9:499-511(2009).