Stem-loop oha-mir-5470

Accession

MI0031479

Description

Ophiophagus hannah oha-mir-5470 precursor miRNA

Gene family

MIPF0001967; mir-5470

Sequence

uccauuuucuccuccCACAGGAUAUGAGUAACUCUUauugaaaucaugaggcaguuuauuauucacaucuugugguaagggaguacauaccu
........(((((.(((((((((.((((((((((((..((....))..))).)))....)))))).)))))))))...))))).........

Structure

-uccauuuu     --c         A      ----   -   au  a 
         cuccu   cCACAGGAU UGAGUA    ACU CUU  ug a
         |||||   ||||||||| ||||||    ||| |||  ||  
         gaggg   gguguucua acuuau    uga gga  ac a
uccauacau     aau         c      uauu   c   gu  u 

Annotation confidence Not enough data

Genome context

AZIM01000302.1: 289314-289405 [-]

Mature oha-miR-5470

• Accession: MIMAT0036941
• Description: Ophiophagus hannah oha-miR-5470 mature miRNA
• Sequence: 16 - CACAGGAUAUGAGUAACUCUU - 36
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656