Stem-loop oha-mir-490

Accession

MI0031476

Description

Ophiophagus hannah oha-mir-490 precursor miRNA

Gene family

MIPF0000229; mir-490

Sequence

acaacgcuggugugauauguucaugauucgacaCCAUGGAUCUCCAGGUGGGUcaagauuauagagaaacacCAACCUGGAGGACUCCAUGCUGUugagcuguucacaagcagcagga
.....((((.(((((...(((((.......(((.(((((((((((((((.(((.................))).)))))))))..)))))).))))))))...)))))..))))....

Structure

acaac    -g     uau     ugauucg   C      --         G   caagauu 
     gcug  uguga   guuca       aca CAUGGA  UCUCCAGGU GGU       a
     ||||  |||||   |||||       ||| ||||||  ||||||||| |||       u
     cgac  acacu   cgagu       UGU GUACCU  GGAGGUCCA Cca       a
-agga    ga     ugu     -------   C      CA         A   caaagag 

Annotation confidence Not enough data

Genome context

AZIM01000546.1: 118055-118172 [+]

Mature oha-miR-490-5p

• Accession: MIMAT0036936
• Description: Ophiophagus hannah oha-miR-490-5p mature miRNA
• Sequence: 34 - CCAUGGAUCUCCAGGUGGGU - 53
• Evidence: not_experimental

Mature oha-miR-490-3p

• Accession: MIMAT0036937
• Description: Ophiophagus hannah oha-miR-490-3p mature miRNA
• Sequence: 73 - CAACCUGGAGGACUCCAUGCUGU - 95
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656