miRBase entry: oha-mir-3618

Stem-loop oha-mir-3618


Accession
MI0031462
Description
Ophiophagus hannah oha-mir-3618 precursor miRNA
Gene family
MIPF0001710; mir-3618


Sequence

uauuuaagcugaaugcauugugauuuccaguaauugagacagugauucugaaagcUGUCCACAUUAAUGAAAAGAGCaauguagucagcuuaacug
...(((((((((.((((((((..(((.((.((((((.((((((..........)))))))).)))).)).)))..)))))))).)))))))))...

Structure
uau         a        ga   c  g    -  a      gauu 
   uuaagcuga ugcauugu  uuu ca uaau ug gacagu    c
   ||||||||| ||||||||  ||| || |||| || ||||||     
   aauucgacu auguaaCG  AAA GU AUUA AC CUGUcg    u
guc         g        AG   A  A    C  -      aaag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
AZIM01003844.1: 64757-64852 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from oha-mir-3618
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oha-miR-3618

Accession MIMAT0036911
Description Ophiophagus hannah oha-miR-3618 mature miRNA
Sequence 56 - UGUCCACAUUAAUGAAAAGAGC - 77
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656