miRBase entry: oha-mir-223

Stem-loop oha-mir-223


Accession
MI0031429
Description
Ophiophagus hannah oha-mir-223 precursor miRNA
Gene family
MIPF0000067; mir-223


Sequence

cuguGUGUAUUUGACAAGCUGAGUUcgacacucaguguggcagUGUCAGUUUGUCAAAUAUACAAagugcggcauuugu
((.(((((((((((((((((((...(.((((...)))).).....))))))))))))))))))).))............

Structure
------------  g                   --GUU g    u 
            cu uGUGUAUUUGACAAGCUGA     c acac  
            || |||||||||||||||||||     | |||| c
            ga ACAUAUAAACUGUUUGACU     g ugug  
uguuuacggcgu  A                   GUgac g    a 


Annotation confidence Not enough data
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Genome context
AZIM01002752.1: 34486-34564 [-]

Database links

Mature oha-miR-223-5p

Accession MIMAT0036852
Description Ophiophagus hannah oha-miR-223-5p mature miRNA
Sequence 5 - GUGUAUUUGACAAGCUGAGUU - 25
Evidence not_experimental

Mature oha-miR-223-3p

Accession MIMAT0036853
Description Ophiophagus hannah oha-miR-223-3p mature miRNA
Sequence 44 - UGUCAGUUUGUCAAAUAUACAA - 65
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656