miRBase entry: oha-mir-222a

Stem-loop oha-mir-222a


Accession
MI0031427
Description
Ophiophagus hannah oha-mir-222a precursor miRNA
Gene family
MIPF0000051; mir-221


Sequence

cucaucagucGCUCAGUAGUCAGUGUAGAUucuguuucuucagcagucagcAGCUACAUCUGGCUACUGGGUCUCugaagacaucuuguagcagcuu
.((.((((..((((((((((((((((((...(((((.((.....))..)))))))))).)))))))))))))..)))).))................

Structure
---------------c  a    uc             -     AUu     -u  u 
                uc ucag  GCUCAGUAGUCAG UGUAG   cuguu  cu c
                || ||||  ||||||||||||| |||||   |||||  || a
                ag aguC  UGGGUCAUCGGUC ACAUC   GAcga  ga g
uucgacgauguucuac  a    UC             U     ---     cu  c 


Annotation confidence Not enough data
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Genome context
AZIM01002126.1: 55630-55726 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from oha-mir-222a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oha-miR-222a-5p

Accession MIMAT0036848
Description Ophiophagus hannah oha-miR-222a-5p mature miRNA
Sequence 11 - GCUCAGUAGUCAGUGUAGAU - 30
Evidence not_experimental

Mature oha-miR-222a-3p

Accession MIMAT0036849
Description Ophiophagus hannah oha-miR-222a-3p mature miRNA
Sequence 52 - AGCUACAUCUGGCUACUGGGUCUC - 75
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656