miRBase entry: oha-mir-22a

Stem-loop oha-mir-22a

Accession

MI0031425

Description

Ophiophagus hannah oha-mir-22a precursor miRNA

Gene family

MIPF0000053; mir-22

Sequence

cuacccgcagcaguucuucaguggcacgcuuuacguccccuccagcaacuaAAGCUGCCAGUUGAAGAACUGUuggccguagc
((((...(((((((((((((((((((.((((((.((..(.....)..))))))))))))).))))))))))))))...)))).

Structure

-    ccg              -     c      c  cc c 
 cuac   cagcaguucuucag uggca gcuuua gu  c u
 ||||   |||||||||||||| ||||| |||||| ||  | c
 gaug   guUGUCAAGAAGUU ACCGU CGAAau ca  g c
c    ccg              G     -      -  ac a

Annotation confidence Not enough data

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Genome context

AZIM01069197.1: 502-584 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-22a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-22a

Accession	MIMAT0036845
Description	Ophiophagus hannah oha-miR-22a mature miRNA
Sequence	52 - AAGCUGCCAGUUGAAGAACUGU - 73
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656