miRBase entry: oha-mir-219-2

Stem-loop oha-mir-219-2


Accession
MI0031423
Description
Ophiophagus hannah oha-mir-219-2 precursor miRNA
Gene family
MIPF0000044; mir-219


Sequence

agcccuggcuugUGAUUGUCCAAACGCAAUUCUUGucucuccacCGAGAGUUGAGUCUGGACAUCaagagccgggguug
(((((((((((.((((.(((((.((.(((((((((.........))))))))).)).))))))))).))))))))))).

Structure
-           g    U     A  G         ucu 
 agcccuggcuu UGAU GUCCA AC CAAUUCUUG   c
 ||||||||||| |||| ||||| || |||||||||   u
 uuggggccgag aCUA CAGGU UG GUUGAGAGC   c
g           a    -     C  A         cac 


Annotation confidence Not enough data
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Genome context
AZIM01007730.1: 8609-8687 [-]

Database links

Mature oha-miR-219-5p

Accession MIMAT0036841
Description Ophiophagus hannah oha-miR-219-5p mature miRNA
Sequence 13 - UGAUUGUCCAAACGCAAUUCUUG - 35
Evidence not_experimental

Mature oha-miR-219-2-3p

Accession MIMAT0036843
Description Ophiophagus hannah oha-miR-219-2-3p mature miRNA
Sequence 45 - CGAGAGUUGAGUCUGGACAUC - 65
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656