Stem-loop oha-mir-196a

Accession

MI0031389

Description

Ophiophagus hannah oha-mir-196a precursor miRNA

Gene family

MIPF0000031; mir-196

Sequence

ggaaugaaccacaacugcucugugaauUAGGUAGUUUCACGUUGUUGGGaauucauuuuuaacaCGCAAGAACAUAAAACUACCUgguuuacgccaguuuacuc
((......))..(((((...(((((((((((((((((...(((.(((.(...............).))).)))...))))))))))))))))).))))).....

Structure

ggaaugaaccac     cuc                 CAC   G   G aauuca 
            aacug   ugugaauUAGGUAGUUU   GUU UUG G      u
            |||||   |||||||||||||||||   ||| ||| |      u
            uugac   gcauuuggUCCAUCAAA   CAA AAC C      u
-------cucau     --c                 AUA   G   G acaauu 

Annotation confidence Not enough data

Genome context

AZIM01000025.1: 268340-268443 [-]

Mature oha-miR-196a-5p

• Accession: MIMAT0036783
• Description: Ophiophagus hannah oha-miR-196a-5p mature miRNA
• Sequence: 28 - UAGGUAGUUUCACGUUGUUGGG - 49
• Evidence: not_experimental

Mature oha-miR-196a-3p

• Accession: MIMAT0036784
• Description: Ophiophagus hannah oha-miR-196a-3p mature miRNA
• Sequence: 65 - CGCAAGAACAUAAAACUACCU - 85
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656