miRBase entry: oha-mir-1905

Stem-loop oha-mir-1905


Accession
MI0031384
Description
Ophiophagus hannah oha-mir-1905 precursor miRNA
Gene family
MIPF0000753; mir-1905


Sequence

uguaggugugugucuguugcuggaugcgcuugauggucgcucccuuugggccCACCACUAGCCCGACCACACGGUAaggaacccguacuug
.....(((((.(((.((((.(((.((.((((((.((......)).)))))).))))).))))..))))))))...................

Structure
--------------uguag     u   -u    c   a  c      u  uc 
                   gugug guc  guug ugg ug gcuuga gg  g
                   ||||| |||  |||| ||| || |||||| ||   
                   CACAC CAG  CGAU ACC AC cggguu cc  c
guucaugcccaaggaAUGG     -   CC    C   -  c      u  cu 


Annotation confidence Not enough data
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Genome context
AZIM01001727.1: 42185-42275 [+]

Database links

Mature oha-miR-1905

Accession MIMAT0036774
Description Ophiophagus hannah oha-miR-1905 mature miRNA
Sequence 53 - CACCACUAGCCCGACCACACGGUA - 76
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656