miRBase entry: oha-mir-182

Stem-loop oha-mir-182


Accession
MI0031379
Description
Ophiophagus hannah oha-mir-182 precursor miRNA
Gene family
MIPF0000116; mir-182


Sequence

ugucUUUGGCAAUGGUAGAACUCACACUGgugagcuaucugguuccggUGGUUCUAGACUUGCCAACUAccgcc
.((..(((((((...((((((...((((((.((.(.....).))))))))))))))...)))))))..))....

Structure
---u  cU       UGG      UCA      u  g u 
    gu  UUGGCAA   UAGAAC   CACUGg ga c a
    ||  |||||||   ||||||   |||||| || | u
    cA  AACCGUU   AUCUUG   GUggcc uu g c
ccgc  UC       CAG      ---      -  g u 


Annotation confidence Not enough data
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Genome context
AZIM01011671.1: 467-540 [-]

Database links

Mature oha-miR-182-5p

Accession MIMAT0036764
Description Ophiophagus hannah oha-miR-182-5p mature miRNA
Sequence 5 - UUUGGCAAUGGUAGAACUCACACUG - 29
Evidence not_experimental

Mature oha-miR-182-3p

Accession MIMAT0036765
Description Ophiophagus hannah oha-miR-182-3p mature miRNA
Sequence 49 - UGGUUCUAGACUUGCCAACUA - 69
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656