Stem-loop oha-mir-1788

Accession

MI0031373

Description

Ophiophagus hannah oha-mir-1788 precursor miRNA

Gene family

MIPF0000792; mir-1788

Sequence

cauauaccugcuuguacugGGCUUGUUUUCAGUUGCCUGCGgcuggcuaauaggacuCAGGCAGCUAAAGCAAGCCUGgggcaugaaaggugaaucag
....(((((...(((.(((((((((((((.(((((((((.(.(((.....)))..).)))))))))))))))))))))).)))....)))))......

Structure

--caua     -gcu   a             C         C -g   g 
      uaccu    ugu cugGGCUUGUUUU AGUUGCCUG G  cug c
      |||||    ||| ||||||||||||| ||||||||| |  ||| u
      gugga    acg gGUCCGAACGAAA UCGACGGAC c  gau a
gacuaa     aagu   g             -         u ag   a 

Annotation confidence Not enough data

Genome context

AZIM01000184.1: 463348-463445 [+]

Mature oha-miR-1788-5p

• Accession: MIMAT0036753
• Description: Ophiophagus hannah oha-miR-1788-5p mature miRNA
• Sequence: 20 - GGCUUGUUUUCAGUUGCCUGCG - 41
• Evidence: not_experimental

Mature oha-miR-1788-3p

• Accession: MIMAT0036754
• Description: Ophiophagus hannah oha-miR-1788-3p mature miRNA
• Sequence: 58 - CAGGCAGCUAAAGCAAGCCUG - 78
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656